Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGACGGCTGCAGCTGA
...(((((((((((((..(((&))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_203285
GeneSymbolNECTIN1
Binding site512,530
Score0.846
Seed0
Au0.221
Energy-25.9
Binding len18
Me-6.515
Phylopstem-0.7397226461538463
Phylopflank-0.5293260599999999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure