Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTGAGCCCAGAATGCAAC
(((((.(((.((((..(((((&)))))..)))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_203292
GeneSymbolRBBP8
Binding site264,286
Score0.846
Seed0
Au0.544
Energy-19.2
Binding len22
Me-8.05
Phylopstem0.48964798
Phylopflank1.574678655
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end6
Position5UTR
2D Structure