Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAACAAACCTTACCTCAGCTGA
...((((((.(((...(((((&.)))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_203298
GeneSymbolCHCHD1
Binding site361,385
Score0.923
Seed0
Au0.647
Energy-18.6
Binding len17
Me-9.582
Phylopstem-0.020442366666666684
Phylopflank0.17165948250000002
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure