Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGGCCGCCCGGGTGGCGCGGTGGCGGCGGCTGCGGCTGCAGC
((((((((((((((((.....&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_203301
GeneSymbolFBXO33
Binding site325,371
Score0.923
Seed1
Au0.162
Energy-27.5
Binding len18
Me-3.938
Phylopstem0.8788351250000002
Phylopflank0.60413163125
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure