Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATCAATTGCAGCAAGGCGAG
((((.((((((((((...(((&)))..))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_203303
GeneSymbolZCCHC13
Binding site504,527
Score0.846
Seed0
Au0.397
Energy-20.3
Binding len23
Me-8.29
Phylopstem0.16412250999999997
Phylopflank-0.12761877625
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure