Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGGGCCGCGGCGGGGTCATTGATGCAGT
((((((((((((((.(((((.&)))).).)))))))))...........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350979
GeneSymbolZSCAN25
Binding site53,86
Score0.974
Seed1
Au0.382
Energy-22.8
Binding len33
Me-4.673
Phylopstem-0.11755750799999996
Phylopflank0.23899191375000012
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position5UTR
2D Structure