Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGCCCCTCAGCTGCC
..(((((((.(((((..((((&)))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001369611
GeneSymbolSLC38A7
Binding site3545,3565
Score0.923
Seed1
Au0.412
Energy-21.9
Binding len20
Me-6.433
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
Position3UTR
2D Structure