Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGGCGCTCAGCAGAGACCCCGGGCTGCGGCTGCAC
.(((((((((((((....(((&.)))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350994
GeneSymbolSMIM32
Binding site187,225
Score0.846
Seed1
Au0.25
Energy-25.6
Binding len21
Me-4.762
Phylopstem0.16233023076923075
Phylopflank-0.08227750249999999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure