Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCGTGCAGCTGGGAG
((.((((((((((((......&)))).)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001369747
GeneSymbolITGB1BP1
Binding site43,60
Score0.846
Seed0
Au0.397
Energy-19.6
Binding len17
Me-5.728
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end2
Position5UTR
2D Structure