Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCTTCTGCAGCAGCAT
.(((.(((((((..((.((((&))))))..))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001369788
GeneSymbolSCN8A
Binding site8083,8103
Score0.923
Seed0
Au0.544
Energy-23.0
Binding len20
Me-10.058
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end6
Position3UTR
2D Structure