Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGCCATCCTTGAGAAAAATAGACAGATGGCCAAGGAGAGGGGCCTAATAAGCCCCAGTGA
(((((((((((((((.(((...&.)))..)))))))))))...........)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001351033
GeneSymbolDGKA
Binding site171,234
Score0.808
Seed1
Au0.515
Energy-24.5
Binding len33
Me-4.171
Phylopstem-0.05896704615384619
Phylopflank0.7282632287500002
Longest consecutive pairings11
Position of longest consecutive pairings16
Pairings in 3prime end4
Position5UTR
2D Structure