Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGCATCCGAGAGTTGCAT
.(((((((.(((.(((..(((&))).))).)))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351050
GeneSymbolSTX2
Binding site766,787
Score0.846
Seed1
Au0.529
Energy-18.6
Binding len21
Me-6.139
Phylopstem-0.3033547142857143
Phylopflank-0.42227167875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure