Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAGCACATGCCGTGGCACCAAG
(((..(((((((((((.((((&)))).)))...))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001369919
GeneSymbolPOPDC2
Binding site1766,1791
Score0.923
Seed0
Au0.559
Energy-19.6
Binding len25
Me-11.089
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure