Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCAGTGAGCAGCTGTC
..((((((((..(((((((((&)))))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001370
GeneSymbolDNAH6
Binding site4983,5004
Score0.846
Seed1
Au0.544
Energy-23.2
Binding len21
Me-11.129
Phylopstem4.40410288888889
Phylopflank4.460604613425
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure