Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGGCGCCCAGCGGCTGCAC
.(((((((((((.(((..(((&)))...))).)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330542
GeneSymbolHEXD
Binding site854,877
Score0.846
Seed1
Au0.368
Energy-22.9
Binding len23
Me-5.082
Phylopstem2.053289916666667
Phylopflank3.146374885
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure