Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGCACAGCTGCAGCC
.....(((((((((((..((.&))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001370093
GeneSymbolKDM4B
Binding site210,226
Score0.923
Seed0
Au0.353
Energy-21.7
Binding len16
Me-13.666
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure