Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCGCAGTGCTGGGATTACAGCTGCGCGTTGTAAA
((((((((((((((((((...&.))))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001370096
GeneSymbolSBK2
Binding site1845,1884
Score1.0
Seed1
Au0.412
Energy-22.3
Binding len21
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure