Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGCTGTGGCTGCGGG
(((((((((((((.((.....&)).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351056
GeneSymbolTRIM2
Binding site648,665
Score0.923
Seed1
Au0.426
Energy-20.7
Binding len17
Me-4.794
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure