Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTCAACAGAGTCAGCTGCT
..((((((((.((((.((((.&)))).))))...).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001370167
GeneSymbolSYTL4
Binding site3827,3849
Score0.923
Seed1
Au0.588
Energy-20.5
Binding len22
Me-8.015
Phylopstem0.21215083333333334
Phylopflank0.13943578499999998
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure