Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAATCCAGCTGTAAT
(((((((((.((((((.....&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001370216
GeneSymbolRAP1A
Binding site3711,3727
Score1.0
Seed1
Au0.603
Energy-20.0
Binding len16
Me-5.18
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure