Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTCCTCCGCCAGCTGA
...(((((((((..(..(((.&)))..)..)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330543
GeneSymbolEPSTI1
Binding site2309,2328
Score0.923
Seed0
Au0.544
Energy-19.4
Binding len19
Me-8.894
Phylopstem1.17934261
Phylopflank0.95094182125
Longest consecutive pairings5
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure