Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTTTTGGAGTCAAGGGTTGCAACCTAGGGCAACTGTAAA
((((((.(((((((((((...&.))))))))....))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001370300
GeneSymbolSS18L2
Binding site1501,1544
Score0.846
Seed0
Au0.632
Energy-18.7
Binding len24
Me-5.481
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end5
Position3UTR
2D Structure