Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCCGAGGTGCCAGGG
.((((((((.....((((....&))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001370302
GeneSymbolTSPAN11
Binding site2723,2740
Score0.846
Seed1
Au0.294
Energy-19.0
Binding len17
Me-13.353
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure