Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCCCACGTGCTGCAGCTGCAC
.(((((((((((((((..(((&)))...))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001370342
GeneSymbolZBTB42
Binding site1077,1100
Score0.846
Seed1
Au0.382
Energy-23.2
Binding len23
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure