Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACAGCCAGTGACACAGGACTTTCAGAGACCAAGGCCAGGGTCTGCTGCAC
.((((((.((((((((((((.&))))))))))...........................))........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001370343
GeneSymbolHMCES
Binding site1283,1337
Score0.846
Seed1
Au0.529
Energy-20.1
Binding len54
Me-6.107
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings44
Pairings in 3prime end7
PositionCDS
2D Structure