Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAGGCCCTGCAGCTGAGGCTGCT
..((((((.((((((((.(((&.))).)))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351102
GeneSymbolUSP19
Binding site3859,3885
Score0.923
Seed1
Au0.294
Energy-25.9
Binding len21
Me-6.013
Phylopstem1.66697675
Phylopflank1.3009271825000002
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure