Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTATGCAACGGGCAGCTGGGC
.(.(((((((.(((((((((.&))).))))))..))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001370401
GeneSymbolRAB11FIP3
Binding site1572,1594
Score0.846
Seed0
Au0.338
Energy-23.4
Binding len22
Me-8.176
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings3
Pairings in 3prime end7
PositionCDS
2D Structure