Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAATGCTAGCGCCACTGCTGATGCGGCTGCC
..(((((((((...(((.(((&.)))..)))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001370416
GeneSymbolCTXN2
Binding site11,44
Score0.846
Seed1
Au0.397
Energy-21.0
Binding len22
Me-10.45
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure