Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATTGGTCAGA
..(((((...(((((((((...&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001351108
GeneSymbolUSP19
Binding site3580,3595
Score0.846
Seed0
Au0.485
Energy-16.7
Binding len15
Me-9.57
Phylopstem1.1867302222222222
Phylopflank0.61188518375
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure