Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGAGGCCCCGGCTGCAC
.((((((((.((((...((((&))))...)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351108
GeneSymbolUSP19
Binding site1309,1330
Score0.846
Seed1
Au0.294
Energy-24.5
Binding len21
Me-6.004
Phylopstem2.1993625
Phylopflank1.3561025499999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure