Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCTCTGATGAACAGCGTCAAGACCCAGCTGCAC
.((((((((.((((...(.((&.)).)...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001370470
GeneSymbolCCDC106
Binding site996,1033
Score0.923
Seed1
Au0.397
Energy-21.0
Binding len21
Me-6.004
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure