Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTCAGACCCAGTTGCAC
.((((((((.((((..(((((&)))))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001370484
GeneSymbolCOLCA2
Binding site826,847
Score0.923
Seed1
Au0.456
Energy-22.7
Binding len21
Me-6.004
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure