Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TATCCAGAGAAAGGATGCCC
....((((((((((((((((..&))))))))..))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001351114
GeneSymbolHSFX4
Binding site605,625
Score0.808
Seed0
Au0.426
Energy-21.0
Binding len20
Me-9.547
Phylopstem-0.4907313684210526
Phylopflank-0.6055121525
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure