Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAATTGCTTGCTGTG
..(((((.((((((((.((((&))))))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001370486
GeneSymbolKCTD16
Binding site10554,10574
Score0.923
Seed0
Au0.485
Energy-21.3
Binding len20
Me-7.271
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure