Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAGTCTGTATTAAGAAGATATGGCTGCAGA
(((((((((((((((.(((((&)))))))).)))).............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351123
GeneSymbolTEX49
Binding site424,459
Score0.846
Seed1
Au0.574
Energy-19.8
Binding len35
Me-4.171
Phylopstem0.4753310827586207
Phylopflank0.9677649612499999
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end7
PositionCDS
2D Structure