Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGCAGCCGCAGGAGCC
..((..((((((((((((...&))))))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001370512
GeneSymbolPSPH
Binding site464,481
Score0.923
Seed0
Au0.279
Energy-23.6
Binding len17
Me-10.977
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end5
Position5UTR
2D Structure