Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGATCCGGAGCTGCGC
.(((((((.(((.....(((.&)))....))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001370528
GeneSymbolPRICKLE2
Binding site37,56
Score0.846
Seed1
Au0.382
Energy-21.6
Binding len19
Me-7.964
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure