Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCGTCGTGGCGCACCTGTACGCGCGGCAGCTGACGCTGGAGCAGCTGCAC
.(((((((((((((((...((&.))...)))))).........))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001370587
GeneSymbolNUDT16L1
Binding site325,378
Score0.846
Seed1
Au0.294
Energy-22.7
Binding len31
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure