Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCCCCGATTCGCAGCTGTC
..(((((((((((((...(((&)))...)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001370660
GeneSymbolCUL1
Binding site3285,3306
Score0.923
Seed1
Au0.441
Energy-19.2
Binding len21
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure