Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAATGCTGCCACAAGCTGCAT
.((((((((.(((.((((((.&)))..))).))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351148
GeneSymbolTESPA1
Binding site1939,1962
Score0.846
Seed1
Au0.544
Energy-20.5
Binding len23
Me-5.893
Phylopstem-0.21101576666666666
Phylopflank-0.015914028749999982
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure