Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGTGCGGCTGCAGGAGTGCAT
.((((.(((((((((((.((.&)).)))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001371072
GeneSymbolUSP11
Binding site2238,2260
Score1.0
Seed0
Au0.397
Energy-22.5
Binding len22
Me-5.694
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure