Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCCTCTGTGGCAGCTGCGAG
((((((((((((..((((((.&))))))..))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001371090
GeneSymbolAFAP1
Binding site5141,5165
Score1.0
Seed1
Au0.441
Energy-26.1
Binding len24
Me-6.084
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure