Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTATCATGGATGCTGGGTG
((((((((..((..(((((...&)))))..))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001371116
GeneSymbolFHDC1
Binding site6077,6097
Score0.923
Seed1
Au0.441
Energy-17.7
Binding len20
Me-8.382
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure