Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGTGGGCTCCAGCCCCTTGTCAGCCGCAGCC
.....(((((((((((((((.&.))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351167
GeneSymbolGDPD5
Binding site3393,3427
Score0.923
Seed0
Au0.353
Energy-25.8
Binding len18
Me-13.666
Phylopstem-1.522781125
Phylopflank-0.46273519000000013
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure