Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGACTTCCCAGCTGCAGC
(((((((((.((..((..(((&)))..))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330552
GeneSymbolNLRC5
Binding site3438,3459
Score1.0
Seed1
Au0.412
Energy-23.7
Binding len21
Me-7.326
Phylopstem0.19697293333333332
Phylopflank0.09837046375000004
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure