Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGTCAGCCGCAGCC
.....(((((((((((((((.&))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351168
GeneSymbolGDPD5
Binding site2611,2628
Score0.846
Seed0
Au0.353
Energy-25.4
Binding len17
Me-13.666
Phylopstem5.037264218749999
Phylopflank4.44804498625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure