Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGTCAACCTGGTTGTAAT
(((((((((.(((((((((((&)))))).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001371247
GeneSymbolSCN2A
Binding site2354,2376
Score1.0
Seed1
Au0.544
Energy-21.9
Binding len22
Me-5.18
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure