Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGCATTTATTTCAATCGCAGAAGCCAGC
..((((((((.(((((((((((&)))))))))))))).............))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001371273
GeneSymbolNYAP2
Binding site6185,6218
Score0.846
Seed1
Au0.662
Energy-15.8
Binding len33
Me-7.782
Phylopstem0.22147572727272727
Phylopflank0.0584870950000001
Longest consecutive pairings14
Position of longest consecutive pairings19
Pairings in 3prime end8
Position3UTR
2D Structure