Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGTACAACTGAAAGCAGCTGTC
..(((((((((((((((.(((&))).)))))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001371280
GeneSymbolREEP1
Binding site2937,2961
Score0.885
Seed1
Au0.618
Energy-22.2
Binding len24
Me-4.957
Phylopstem3.698843157894737
Phylopflank4.505569917499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure