Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATGTGCAGAGGTGCCAGC
..(((((((....((((.(((.&))).))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001371304
GeneSymbolSH3BP4
Binding site4235,4254
Score0.846
Seed1
Au0.515
Energy-17.0
Binding len19
Me-13.66
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure